from ditact_pic import plot from spin_image import SpinImage, FFT import sys import numpy as np import matplotlib.pyplot as plt import glob import scipy.interpolate as ip from lattices import VO2_Lattice plt.style.use(["style", "colors", "one_column"]) def check_percentage(p1, p2): plt.figure() plt.plot(p1, p2) def merge(files): merge = [] plt.figure() for file in files: print(file) data = np.load(file, allow_pickle=True) old_percentage = data["percentage"] w_percentage = data["w_percentage"] # check_percentage(old_percentage, w_percentage) percentage = old_percentage out = [] for o in ["out_1", "out_2", "out_3", "out_4"]: out.append(np.array(data[o])) print(out) out = np.array(out)[:, :, 0] summe = np.max(np.sum(out, axis=0)) out = out / summe merge.append(out) plt.plot(w_percentage,out[0, :], "r") plt.plot(w_percentage,out[3, :], "b") plt.plot(w_percentage,out[2, :], "g") all = sum(merge) summe = np.max(np.sum(all, axis=0)) all = all / summe plt.plot(all[0, :], "k") plt.plot(all[3, :], "k") plt.plot(all[2, :], "k") percentage = 1-percentage return percentage, all def debug(percentage, out): plt.figure() for o in out: plt.plot(percentage, o) plt.plot(percentage, out[0, :], "k") plt.plot(percentage, out[3, :], "k") plt.plot(percentage, out[2, :], "k") def stacked_plot(ax, percentage, out, title=""): stacks = ax.stackplot(percentage, out[[0, 3, 2]], colors=[ "w"], ls=(0, (0, 1)), ec="w") hatches = ["//", "|", "\\\\"] for stack, hatch, color in zip(stacks, hatches, ["C1", "C0", "C2"]): stack.set_hatch(hatch) stack.set_edgecolor(color) ax.set_xlabel("Metallic Phase (%)") ax.set_ylabel("normalized Intensity ") ax.set_ylim([0.4, 1]) ax.set_xlim([0., 1]) ax.text(0.1, 0.9, "monoclinic", backgroundcolor="w", bbox=dict(boxstyle='square,pad=0.0', ec="None", fc="w")) ax.text(0.6, 0.5, "rutile", backgroundcolor="w", bbox=dict(boxstyle='square,pad=0.0', ec="None", fc="w")) ax.text(0.35, 0.73, "diffusive", backgroundcolor="w", bbox=dict(boxstyle='square,pad=0.0', ec="None", fc="w")) ax.stackplot(percentage, out[[0, 3, 2]], colors=["None"], ec="k") def time_scale(ax, p, o): rut_perc = o[0] rut_perc = rut_perc - np.min(rut_perc) rut_perc /= np.max(rut_perc) mono_perc = -o[2] mono_perc = mono_perc - np.min(mono_perc) mono_perc /= np.max(mono_perc) # cs_rut = ip.CubicSpline(p[::-1], rut_perc[::-1]) # cs_mono = ip.CubicSpline(p[::-1], mono_perc[::-1]) cs_rut = ip.interp1d(p[::-1], rut_perc[::-1]) cs_mono = ip.interp1d(p[::-1], mono_perc[::-1]) # plt.figure() # ph = np.linspace(0.01, 0.99, 100) # plt.plot(ph, cs_rut(ph)) # plt.plot(ph, cs_mono(ph)) time = np.linspace(0.01, 3, 1000) phy_phase = 1-np.exp(-time) rut_phase = cs_rut(phy_phase) mono_phase = cs_mono(phy_phase) ax.plot(time, phy_phase, "k:", label="physical") ax.plot(time, rut_phase, label="rutile", color="C1") ax.plot(time, mono_phase, label="monoclinic", color="C2") ax.set_xlabel("time (a.u.)") ax.set_ylabel("Metallic Phase (%)") ax.set_xlim([0, 3]) ax.set_ylim([0, 1]) ax.legend() def read_file(file): files = np.load("./merged.npz") p = files["p"] o = files["o"] return p, o def intens(ax, file, p, o): intens = FFT() intens.load(file) plot(intens, ax) ax.set_xlim([-1, 1]) ax.set_ylim([-.9, .9]) ax.axis("off") #rect = plt.Rectangle((-1, -.8), 2, 1.6, facecolor="None", hatch="//") # ax.add_patch(rect) lat = VO2_Lattice(20, 20) reci = lat.get_spots() print(reci) size = (intens.freqx[1] - intens.freqx[0]) * 20 size2 = size/2 # big_rect = plt.Rectangle((-10, -10), 20, 20, fc="None", ec="k", hatch="//") # ax.add_patch(big_rect) for x, y in zip(reci[0][0], reci[0][1]): if x < 1 and x > -1: if y < 1 and y > -1: print(x, y) rect = plt.Rectangle((-y-size2, x-size2), size, size, fc="C1", ec="k", alpha=0.5) # big_rect.set_clip_path(rect) ax.add_patch(rect) for x, y in zip(reci[1][0], reci[1][1]): if x < 1 and x > -1: if y < 1 and y > -1: print(x, y) rect = plt.Rectangle((-y-size2, x-size2), size, size, fc="C2", ec="k", alpha=0.5) ax.add_patch(rect) axins = ax.inset_axes([0.0, 0.0, 0.5, 0.5]) axins.plot(p, o[0], label="rut.", color="C1") axins.plot(p, o[2], label="mono.", color="C2") axins.plot(p, o[3], label="diff.", color="C0") axins.legend(loc='center left', bbox_to_anchor=(1, 0.5)) axins.set_xlim([0, 1]) axins.set_ylim([0, 1]) axins.set_xlabel("phase (%)") axins.set_ylabel("signal",labelpad=-5) # axins.get_yaxis().set_visible(False) # axins.yaxis.tick_right() axins.set_yticks([0, 1]) if __name__ == "__main__": p, o = merge(sys.argv[2:]) np.savez("merged.npz", p=p, o=o) # eval_data_print(f) fig, axs = plt.subplots(1, 3) fig.set_figheight(2) stacked_plot(axs[1], p, o) time_scale(axs[2], p, o) intens(axs[0], sys.argv[1], p, o) plt.tight_layout() plt.savefig("analysis.pdf") plt.savefig("analysis.png") plt.show()